Gather, process, and organize data, perform bioinformatics analyses, view generated graphics, and export the result in various formats. Work with different alignments of RNA, DNA, proteins, and consensus sequences, create reverse complements, shuffle sequences, and check genetic translations.
CLC Sequence Viewer includes a number of features for doing basic bioinformatics analysis. You can create and edit alignments, work with interactive restriction site analysis, phylogenetics, or advanced DNA to protein translation, or you can use the integrated GenBank search options and many other features.
Bioinformatics features: Multiple alignment of DNA, RNA, and proteins , consensus sequence determination and management, conservation score along alignments, etc.
v7.5 [Aug 29, 2014]
New features and improvements:
- The unused "Workflows" button has been removed from the toolbar.
- Local Search enabled from the menu bar now includes filtering on "Path".
- Advanced filtering on tables now includes the option to filter for a space, comma or semi-colon delimited lists of terms.
- Zoom tools redesign: The “Zoom to selection” feature is now also available for sequences, sequence lists, alignments, and read mappings.
- Saving/applying side-panel settings for tables now works for different tables that share some columns.
- Copy operations can now be stopped.
- Import of Example Data and imports done through dragging files into the workbench and dropping them in the Navigation Area will no longer block the user interface while executing. Instead, the import happens as a background process that can be monitored and controlled via the Processes tab in the lower left corner.
- CLC workbenches now support high resolution displays such as Apple retina displays of all data shown in the View Area (including tooltips).
- More informative naming of coding region translations produced by the tool Translate to Protein. The name for a coding region translation consists of the name of the input sequence followed by the annotation type and finally the annotation name.
Changes:
- Due to upgrade to Java 7, Windows Server 2003 and OSX 10.5.8, 10.6 are no longer supported by Oracle. Hence, the system requirements are now: Linux, Windows Vista, Windows 7, Windows 8 or Windows Server 2008, or Mac OS X 10.7 or later.
