Manipulate DNA sequencers and contigs via the suite providing access to editing and automated or manual recombination simulations while also supporting assembly algorithms and manual editing of the presented sequences. Unique visualizations for every project are available.
Sequencher is a DNA sequence assembly and analysis utility. The app has integrated the comprehensive Cufflinks suite for in-depth transcript analysis and differential gene expression of your RNA-Seq data. Sequencher can easily generate unique visualizations of your RNA-Seq data with custom plots and charts giving you publication-ready graphics in seconds.
v5.2 [Nov 10, 2013]
- Sequencher Connections - Perform multiple customized BLAST searches or MUSCLE alignment on single or groups of sequences. View your results in webpage, text, or XML format all without leaving Sequencher.
- Use MUSCLE to create phylogenetic trees that can be viewed in multiple formats.
- BWA reference-guided alignment algorithm for NGS data sets.
- Added GSNAP flexibility - You now have the ability to capture reads that didn't align, or even to select only reads that didn't align.
